Index Seq ID Count Primer type Orientation Start Len tm GC% Any compl 3' compl Seq Prod size Seq len Included len Pair any compl Pair 3' compl Motif Motif Len SSR SSRLen 1 @GRC13_0019_FC:6:10:18590:2614#GTAT/1_@GRC13_0019_FC:6:10:18590:2614#GTAT/2 1 SSR FORWARD 45 19 54.65 57.89 3.00 3.00 CCACTTCCTCCTCTGACTC 124 202 202 3.00 2.00 CCT 3 CCTCCTCCTCCT 12 2 @GRC13_0019_FC:6:10:18590:2614#GTAT/1_@GRC13_0019_FC:6:10:18590:2614#GTAT/2 1 SSR REVERSE 168 19 54.04 42.11 4.00 2.00 CTGCTCCAAGAAAACTTGA 3 @GRC13_0019_FC:6:15:15318:1547#GTAT/1_@GRC13_0019_FC:6:15:15318:1547#GTGG/2 1 SSR FORWARD 12 19 54.19 36.84 4.00 0.00 ATTTTGCACATCCACATTC 149 202 202 4.00 0.00 ATA 3 ATAATAATAATAATA 15 4 @GRC13_0019_FC:6:15:15318:1547#GTAT/1_@GRC13_0019_FC:6:15:15318:1547#GTGG/2 1 SSR REVERSE 160 19 54.21 36.84 5.00 2.00 TTTGATCTCCATTGGCTTA 5 @GRC13_0019_FC:6:20:6995:14775#GTAT/1_@GRC13_0019_FC:6:20:6995:14775#GTAT/2 1 SSR FORWARD 12 20 53.41 40.00 7.00 3.00 CCTCATCACTAAATGATCCA 185 202 202 3.00 3.00 CTT 3 CTTCTTCTTCTT 12 6 @GRC13_0019_FC:6:20:6995:14775#GTAT/1_@GRC13_0019_FC:6:20:6995:14775#GTAT/2 1 SSR REVERSE 196 19 53.59 47.37 4.00 2.00 GCACCACCTAGAAGATTCA 7 @GRC13_0019_FC:6:21:5352:14098#GTAT/1_@GRC13_0019_FC:6:21:5352:14098#GTAT/2 1 SSR FORWARD 42 19 53.78 47.37 3.00 1.00 TTATGACTCGCTCCAAGAC 116 202 202 5.00 3.00 CTT 3 CTTCTTCTTCTT 12 8 @GRC13_0019_FC:6:21:5352:14098#GTAT/1_@GRC13_0019_FC:6:21:5352:14098#GTAT/2 1 SSR REVERSE 157 19 51.72 47.37 5.00 3.00 ATTCTCCTCAGAGCAACTC 9 @GRC13_0019_FC:6:28:3436:18316#GTAT/1_@GRC13_0019_FC:6:28:3436:18316#GTAT/2 1 SSR FORWARD 14 19 53.18 42.11 5.00 0.00 TTCCACTTAGGGTGAAAGA 150 202 202 6.00 2.00 TAT 3 TATTATTATTAT 12 10 @GRC13_0019_FC:6:28:3436:18316#GTAT/1_@GRC13_0019_FC:6:28:3436:18316#GTAT/2 1 SSR REVERSE 163 19 53.80 47.37 3.00 0.00 ATTCAACCTCCCCACTATC 11 @GRC13_0019_FC:6:28:3436:18316#GTAT/1_@GRC13_0019_FC:6:28:3436:18316#GTAT/2 1 SSR FORWARD 14 19 53.18 42.11 5.00 0.00 TTCCACTTAGGGTGAAAGA 150 202 202 6.00 2.00 TAT 3 TATTATTATTATTAT 15 12 @GRC13_0019_FC:6:28:3436:18316#GTAT/1_@GRC13_0019_FC:6:28:3436:18316#GTAT/2 1 SSR REVERSE 163 19 53.80 47.37 3.00 0.00 ATTCAACCTCCCCACTATC 13 @GRC13_0019_FC:6:34:5130:21209#GTAT/1_@GRC13_0019_FC:6:34:5130:21209#GTAT/2 1 SSR FORWARD 57 19 53.66 47.37 5.00 3.00 ACTTGGTCAGTGAGGATCA 117 202 202 4.00 2.00 GAA 3 GAAGAAGAAGAA 12 14 @GRC13_0019_FC:6:34:5130:21209#GTAT/1_@GRC13_0019_FC:6:34:5130:21209#GTAT/2 1 SSR REVERSE 173 19 53.86 42.11 3.00 1.00 GACATTGGAAGCATTTGAC 15 @GRC13_0019_FC:6:45:8089:9076#GTAT/1_@GRC13_0019_FC:6:45:8089:9076#GTAT/2 1 SSR FORWARD 17 20 53.85 35.00 5.00 2.00 GCATTGCCCTATTTTTAAGT 145 202 202 4.00 0.00 TAA 3 TAATAATAATAA 12 16 @GRC13_0019_FC:6:45:8089:9076#GTAT/1_@GRC13_0019_FC:6:45:8089:9076#GTAT/2 1 SSR REVERSE 161 19 53.90 42.11 6.00 0.00 AAAAGCGGTGTACAACAAG 17 @GRC13_0019_FC:6:46:1860:15890#GTAT/1_@GRC13_0019_FC:6:46:1860:15890#GTAT/2 1 SSR FORWARD 22 22 54.02 40.91 3.00 3.00 AACATCTCATACATCCTGTCAC 148 202 202 4.00 3.00 CAT 3 CATCATCATCAT 12 18 @GRC13_0019_FC:6:46:1860:15890#GTAT/1_@GRC13_0019_FC:6:46:1860:15890#GTAT/2 1 SSR REVERSE 169 19 54.42 52.63 4.00 1.00 GGTATAGTGCGACAAGCAG 19 @GRC13_0019_FC:6:48:8716:14898#GTAT/1_@GRC13_0019_FC:6:48:8716:14898#GTAT/2 1 SSR FORWARD 32 19 53.65 42.11 5.00 2.00 GACAACATGCGACACATTA 115 202 202 4.00 3.00 TAT 3 TATTATTATTAT 12 20 @GRC13_0019_FC:6:48:8716:14898#GTAT/1_@GRC13_0019_FC:6:48:8716:14898#GTAT/2 1 SSR REVERSE 146 20 52.80 35.00 2.00 0.00 TTTGTGATACTTCTCGCTTT 21 @GRC13_0019_FC:6:53:19688:13953#GTAT/1_@GRC13_0019_FC:6:53:19688:13953#GTAT/2 1 SSR FORWARD 30 19 53.55 42.11 5.00 2.00 TGACTGTCCCACCATTTAT 160 202 202 5.00 1.00 TTA 3 TTATTATTATTATTATTA 18 22 @GRC13_0019_FC:6:53:19688:13953#GTAT/1_@GRC13_0019_FC:6:53:19688:13953#GTAT/2 1 SSR REVERSE 189 20 53.55 35.00 4.00 0.00 GTTTGAGATGGACAAAAACA 23 @GRC13_0019_FC:6:64:12309:10668#GTAT/1_@GRC13_0019_FC:6:64:12309:10668#GTAT/2 1 SSR FORWARD 4 19 53.86 42.11 5.00 2.00 GGCATTGATTGTTGAACTC 166 202 202 5.00 2.00 GGA 3 GGAGGAGGAGGAGGA 15 24 @GRC13_0019_FC:6:64:12309:10668#GTAT/1_@GRC13_0019_FC:6:64:12309:10668#GTAT/2 1 SSR REVERSE 169 19 53.62 47.37 4.00 2.00 AGCATCATTACCAGTGCTC 25 @GRC13_0019_FC:6:65:8958:11533#GTAT/1_@GRC13_0019_FC:6:65:8958:11533#GTAT/2 1 SSR FORWARD 18 26 53.50 30.77 6.00 2.00 AAGATCACTACATAGTTAGACATCAA 129 202 202 4.00 2.00 AAG 3 AAGAAGAAGAAGAAGAAG 18 26 @GRC13_0019_FC:6:65:8958:11533#GTAT/1_@GRC13_0019_FC:6:65:8958:11533#GTAT/2 1 SSR REVERSE 146 20 54.05 30.00 6.00 0.00 TCATGATTGAACGTTTGTTT 27 @GRC13_0019_FC:6:80:10241:6637#GTAT/1_@GRC13_0019_FC:6:80:10241:6637#GTAT/2 1 SSR FORWARD 26 19 54.25 36.84 7.00 0.00 AAATCCGGGATGTAAAAAG 153 202 202 4.00 0.00 CTG 3 CTGCTGCTGCTG 12 28 @GRC13_0019_FC:6:80:10241:6637#GTAT/1_@GRC13_0019_FC:6:80:10241:6637#GTAT/2 1 SSR REVERSE 178 19 54.48 47.37 4.00 2.00 CTTGCTGCTGGATCATTAG 29 @GRC13_0019_FC:6:84:18612:20250#GTTA/1_@GRC13_0019_FC:6:84:18612:20250#GTAT/2 1 SSR FORWARD 25 19 53.74 42.11 4.00 2.00 TCTCTTCCAAAACTCATGC 133 202 202 8.00 2.00 GTT 3 GTTGTTGTTGTT 12 30 @GRC13_0019_FC:6:84:18612:20250#GTTA/1_@GRC13_0019_FC:6:84:18612:20250#GTAT/2 1 SSR REVERSE 157 19 52.75 31.58 4.00 2.00 AATTTTTGGTTGAGATTGC 31 @GRC13_0019_FC:6:86:18136:6055#GTTC/1_@GRC13_0019_FC:6:86:18136:6055#GTAT/2 1 SSR FORWARD 16 21 53.66 33.33 6.00 1.00 TTGAGCACAATAAGTAACCAA 131 202 202 4.00 1.00 AAG 3 AAGAAGAAGAAG 12 32 @GRC13_0019_FC:6:86:18136:6055#GTTC/1_@GRC13_0019_FC:6:86:18136:6055#GTAT/2 1 SSR REVERSE 146 19 54.30 47.37 4.00 0.00 ATACATAGGTCCCCTCCAA 33 @GRC13_0019_FC:6:86:4636:12660#GTAA/1_@GRC13_0019_FC:6:86:4636:12660#GTAT/2 1 SSR FORWARD 25 19 53.70 47.37 4.00 0.00 TGGGACAAGCTACAAGAAC 158 202 202 5.00 3.00 GAA 3 GAAGAAGAAGAA 12 34 @GRC13_0019_FC:6:86:4636:12660#GTAA/1_@GRC13_0019_FC:6:86:4636:12660#GTAT/2 1 SSR REVERSE 182 20 53.98 40.00 5.00 2.00 CAAGGAAATGGTTTCTTCTC 35 @GRC13_0019_FC:6:88:12347:11315#GTAT/1_@GRC13_0019_FC:6:88:12347:11315#GTAT/2 1 SSR FORWARD 12 20 53.59 40.00 3.00 0.00 TCACTGTTTTGTTCCTTCAC 143 202 202 4.00 1.00 CAT 3 CATCATCATCATCATCATCATCATCAT 27 36 @GRC13_0019_FC:6:88:12347:11315#GTAT/1_@GRC13_0019_FC:6:88:12347:11315#GTAT/2 1 SSR REVERSE 154 19 54.52 31.58 8.00 2.00 TGTTTTAAAATGGCTCGAA 37 @GRC13_0019_FC:6:98:9536:8267#GTAT/1_@GRC13_0019_FC:6:98:9536:8267#GTAT/2 1 SSR FORWARD 43 19 54.21 52.63 2.00 0.00 GAAGAGGAAGCAGAGGAAG 103 202 202 4.00 3.00 AGA 3 AGAAGAAGAAGA 12 38 @GRC13_0019_FC:6:98:9536:8267#GTAT/1_@GRC13_0019_FC:6:98:9536:8267#GTAT/2 1 SSR REVERSE 145 19 54.16 36.84 4.00 2.00 TCTTGAACAACCATTTGCT 39 @GRC13_0019_FC:6:102:9606:20914#GTAT/1_@GRC13_0019_FC:6:102:9606:20914#GTAT/2 1 SSR FORWARD 16 19 53.90 42.11 3.00 0.00 TAGGTTGTCCCATCAAGAA 151 202 202 4.00 0.00 GAA 3 GAAGAAGAAGAA 12 40 @GRC13_0019_FC:6:102:9606:20914#GTAT/1_@GRC13_0019_FC:6:102:9606:20914#GTAT/2 1 SSR REVERSE 166 19 54.32 57.89 8.00 0.00 TCCTCTGGAGGAGTAGGAG 41 @GRC13_0019_FC:6:103:10075:20614#GTAT/1_@GRC13_0019_FC:6:103:10075:20614#GTAT/2 1 SSR FORWARD 42 19 55.42 47.37 4.00 0.00 CAGGGTGGAAATATCTTGG 136 202 202 4.00 1.00 TCC 3 TCCTCCTCCTCCTCC 15 42 @GRC13_0019_FC:6:103:10075:20614#GTAT/1_@GRC13_0019_FC:6:103:10075:20614#GTAT/2 1 SSR REVERSE 177 19 53.79 57.89 1.00 0.00 CTCTCTCCTTCTCCCTCAC 43 @GRC13_0019_FC:6:104:8151:6199#GTAT/1_@GRC13_0019_FC:6:104:8151:6199#GTAT/2 1 SSR FORWARD 35 19 54.11 42.11 5.00 1.00 AGGCTGACAGTGAAAATGA 116 202 202 5.00 3.00 GAA 3 GAAGAAGAAGAA 12 44 @GRC13_0019_FC:6:104:8151:6199#GTAT/1_@GRC13_0019_FC:6:104:8151:6199#GTAT/2 1 SSR REVERSE 150 20 52.83 30.00 4.00 2.00 AATCCTTGGGTATGAATTTT 45 @GRC13_0019_FC:6:118:14155:6667#GTAT/1_@GRC13_0019_FC:6:118:14155:6667#GTAT/2 1 SSR FORWARD 34 19 55.12 42.11 3.00 0.00 AATGACGATGATGACGATG 116 202 202 6.00 3.00 ATG 3 ATGATGATGATG 12 46 @GRC13_0019_FC:6:118:14155:6667#GTAT/1_@GRC13_0019_FC:6:118:14155:6667#GTAT/2 1 SSR REVERSE 149 19 54.34 36.84 3.00 0.00 TTGTCGCTGTCATCTTTTT