[Term]
id: GO:0000746
name: conjugation
namespace: biological_process
def: "The union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms." [SGD:elh]
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0000910
name: cytokinesis
namespace: biological_process
def: "The processes resulting in the division of the cytoplasm of a cell and its separation into two daughter cells. Cytokinesis usually occurs after growth\, replication\, and segregation of cellular components." [GO:ai]
subset: goslim_yeast
subset: gosubset_prok
broad_synonym: "cell division" []
xref_analog: Reactome:68884
is_a: GO:0008150

[Term]
id: GO:0005975
name: carbohydrate metabolism
namespace: biological_process
def: "The chemical reactions involving carbohydrates\, any of a group of organic compounds based of the general formula Cx(H2O)y." [ISBN:0198506732]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0006091
name: generation of precursor metabolites and energy
namespace: biological_process
def: "The formation from simpler components of precursor metabolites\, substances from which energy is derived\, and the processes involved in the liberation of energy from these substances." [GO:jl]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
broad_synonym: "energy pathways" []
is_a: GO:0008150

[Term]
id: GO:0006118
name: electron transport
namespace: biological_process
def: "The transport of electrons from an electron donor to an electron acceptor." [http://cancerweb.ncl.ac.uk/]
subset: goslim_generic
subset: goslim_goa
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
related_synonym: "6-phosphofructokinase reduction" []
related_synonym: "dihydrobiopterin reduction" []
related_synonym: "dihydrolipoamide reduction" []
related_synonym: "dihydrolipoylprotein reduction" []
related_synonym: "dihydropteridine reduction" []
related_synonym: "other pathways of electron transport" []
related_synonym: "oxidized glutathione reduction" []
related_synonym: "protein-disulfide reduction" []
exact_synonym: "electron transfer" []
is_a: GO:0006091
is_a: GO:0006810

[Term]
id: GO:0006259
name: DNA metabolism
namespace: biological_process
def: "The chemical reactions involving DNA\, deoxyribonucleic acid\, one of the two main types of nucleic acid\, consisting of a long\, unbranched macromolecule formed from one\, or more commonly\, two\, strands of linked deoxyribonucleotides." [ISBN:0198506732]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0006350
name: transcription
namespace: biological_process
def: "The synthesis of either RNA on a template of DNA or DNA on a template of RNA." [ISBN:0198506732]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
xref_analog: Reactome:74159
is_a: GO:0008150

[Term]
id: GO:0006412
name: protein biosynthesis
alt_id: GO:0006416
alt_id: GO:0006453
namespace: biological_process
def: "The formation from simpler components of a protein\, rather than of proteins in general." [GO:curators]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
related_synonym: "protein-synthesizing GTPase activity" []
related_synonym: "protein-synthesizing GTPase activity\, elongation" []
related_synonym: "protein-synthesizing GTPase activity\, initiation" []
related_synonym: "protein-synthesizing GTPase activity\, termination" []
exact_synonym: "protein anabolism" []
exact_synonym: "protein formation" []
exact_synonym: "protein synthesis" []
is_a: GO:0008150

[Term]
id: GO:0006464
name: protein modification
namespace: biological_process
def: "The covalent or conformational alteration of one or more amino acid residues within a protein\, resulting in a change in the properties of that protein." [GO:curators]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
related_synonym: "protein tagging activity" []
narrow_synonym: "protein-pyrroloquinoline-quinone linkage" []
xref_analog: Reactome:163841
is_a: GO:0008150

[Term]
id: GO:0006519
name: amino acid and derivative metabolism
namespace: biological_process
def: "The chemical reactions involving amino acids\, organic acids containing one or more amino substituents\, and compounds derived from amino acids." [ISBN:0198506732]
subset: goslim_generic
subset: goslim_goa
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0006629
name: lipid metabolism
namespace: biological_process
def: "The chemical reactions involving lipids\, compounds soluble in an organic solvent but not\, or sparingly\, in an aqueous solvent. Includes fatty acids; neutral fats\, other fatty-acid esters\, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids\, phospholipids and sphingolipids; and carotenes\, polyprenols\, sterols\, terpenes and other isoprenoids." [FB:ma]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0006766
name: vitamin metabolism
namespace: biological_process
def: "The chemical reactions involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems." [GO:ai]
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0006810
name: transport
namespace: biological_process
def: "The directed movement of substances (such as macromolecules\, small molecules\, ions) into\, out of\, within or between cells." [GO:mah]
subset: goslim_generic
subset: goslim_goa
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
related_synonym: "hydrolase activity\, acting on acid anhydrides\, acting on GTP\, involved in cellular and subcellular movement" []
narrow_synonym: "small molecule transport" []
narrow_synonym: "solute\:solute exchange" []
relationship: part_of GO:0008150

[Term]
id: GO:0006930
name: substrate-bound cell migration, cell extension
namespace: biological_process
def: "The formation of a cell surface protrusion\, such as a lamellipodium or filopodium\, at the leading edge of a migrating cell." [ISBN:0815316194, PMID:11944043, PMID:14657486]
subset: goslim_yeast
relationship: part_of GO:0008150

[Term]
id: GO:0006950
name: response to stress
namespace: biological_process
def: "A change in state or activity of a cell or an organism (in terms of movement\, secretion\, enzyme production\, gene expression\, etc.) as a result of a stimulus indicating the organism is under stress. The stress is usually\, but not necessarily\, exogenous (e.g. temperature\, humidity\, ionizing radiation)." [GO:mah]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0006996
name: organelle organization and biogenesis
namespace: biological_process
def: "The assembly and arrangement of any organelle within a cell." [GO:mah]
subset: goslim_generic
subset: goslim_yeast
subset: gosubset_prok
exact_synonym: "organelle organisation and biogenesis" []
is_a: GO:0008150

[Term]
id: GO:0006997
name: nuclear organization and biogenesis
alt_id: GO:0048287
namespace: biological_process
def: "The assembly and arrangement of the nucleus." [WB:ems]
subset: goslim_yeast
related_synonym: "nuclear morphology" []
exact_synonym: "nuclear organisation and biogenesis" []
exact_synonym: "nucleus organization and biogenesis" []
is_a: GO:0006996

[Term]
id: GO:0007010
name: cytoskeleton organization and biogenesis
namespace: biological_process
def: "The assembly and arrangement of cytoskeletal structures." [SGD:mah]
subset: goslim_generic
subset: goslim_yeast
subset: gosubset_prok
related_synonym: "Rho small monomeric GTPase activity" []
related_synonym: "cytoskeletal regulator activity" []
related_synonym: "negative regulation of cytoskeleton" []
related_synonym: "positive regulation of cytoskeleton" []
related_synonym: "regulation of cytoskeleton" []
exact_synonym: "cytoskeleton organisation and biogenesis" []
is_a: GO:0006996

[Term]
id: GO:0007047
name: cell wall organization and biogenesis
namespace: biological_process
def: "The assembly and arrangement of the cell wall\, the rigid or semi-rigid envelope lying outside the cell membrane of plant\, fungal and most prokaryotic cells\, maintaining their shape and protecting them from osmotic lysis." [ISBN:0198506732]
subset: goslim_yeast
subset: gosubset_prok
exact_synonym: "cell wall organisation and biogenesis" []
is_a: GO:0008150

[Term]
id: GO:0007049
name: cell cycle
namespace: biological_process
def: "The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically\, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell\, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division." [GO:curators]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
exact_synonym: "cell-division cycle" []
is_a: GO:0008150

[Term]
id: GO:0007114
name: cell budding
namespace: biological_process
def: "A form of asexual reproduction\, occurring in certain bacteria and fungi (e.g. yeasts) and some primitive animals in which an individual arises from a daughter cell formed by pinching off a part of the parent cell. The budlike outgrowths so formed may sometimes remain attached to the parent cell." [ISBN:0198506732]
subset: goslim_yeast
broad_synonym: "budding" []
is_a: GO:0008150

[Term]
id: GO:0007124
name: pseudohyphal growth
namespace: biological_process
def: "A pattern of cell growth that occurs in conditions of nitrogen limitation and abundant fermentable carbon source. Cells become elongated\, switch to a unipolar budding pattern\, remain physically attached to each other\, and invade the growth substrate." [PMID:11104818, SGD:krc]
subset: goslim_yeast
is_a: GO:0008150

[Term]
id: GO:0007126
name: meiosis
namespace: biological_process
def: "The specialized nuclear and cell division in which a single diploid cell undergoes two nuclear divisions following a single round of DNA replication in order to produce four daughter cells that contain half the number of chromosomes as the diploid cell. Meiosis occurs during the formation of gametes from diploid organisms and at the beginning of haplophase in those organisms that alternate between diploid and haploid generations." [PMID:933432]
subset: goslim_yeast
relationship: part_of GO:0007049

[Term]
id: GO:0007165
name: signal transduction
namespace: biological_process
def: "The cascade of processes by which a signal interacts with a receptor\, causing a change in the level or activity of a second messenger or other downstream target\, and ultimately effecting a change in the functioning of the cell." [GO:curators]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
related_synonym: "neurotrophin TRK receptor activity" []
related_synonym: "neurotrophin TRKA receptor activity" []
related_synonym: "neurotrophin TRKB receptor activity" []
related_synonym: "neurotrophin TRKC receptor activity" []
related_synonym: "nuclear translocation of MAPK during sporulation (sensu Fungi)" []
related_synonym: "nuclear translocation of MAPK during sporulation (sensu Saccharomyces)" []
narrow_synonym: "MAPKKK cascade during sporulation (sensu Fungi)" []
narrow_synonym: "MAPKKK cascade during sporulation (sensu Saccharomyces)" []
narrow_synonym: "activation of MAPK during sporulation (sensu Fungi)" []
narrow_synonym: "activation of MAPK during sporulation (sensu Saccharomyces)" []
narrow_synonym: "activation of MAPKK during sporulation (sensu Fungi)" []
narrow_synonym: "activation of MAPKK during sporulation (sensu Saccharomyces)" []
narrow_synonym: "activation of MAPKKK during sporulation (sensu Fungi)" []
narrow_synonym: "activation of MAPKKK during sporulation (sensu Saccharomyces)" []
narrow_synonym: "inactivation of MAPK during sporulation (sensu Fungi)" []
narrow_synonym: "inactivation of MAPK during sporulation (sensu Saccharomyces)" []
is_a: GO:0008150

[Term]
id: GO:0008150
name: biological_process
namespace: biological_process
def: "A phenomenon marked by changes that lead to a particular result\, mediated by one or more gene products." [GO:curators]
subset: goslim_generic
subset: goslim_goa
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok

[Term]
id: GO:0009653
name: morphogenesis
namespace: biological_process
def: "The process by which anatomical structures are generated and organized. Morphogenesis pertains to the creation of form." [GO:curators, ISBN:0521436125]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
broad_synonym: "embryogenesis and morphogenesis" []
is_a: GO:0008150

[Term]
id: GO:0016044
name: membrane organization and biogenesis
namespace: biological_process
def: "The assembly and arrangement of membranes inside and surrounding the cell." [GO:ai]
subset: goslim_yeast
subset: gosubset_prok
exact_synonym: "membrane organisation and biogenesis" []
is_a: GO:0008150

[Term]
id: GO:0016070
name: RNA metabolism
namespace: biological_process
def: "The chemical reactions involving RNA\, ribonucleic acid\, one of the two main type of nucleic acid\, consisting of a long\, unbranched macromolecule formed from ribonucleotides joined in 3'\,5'-phosphodiester linkage." [ISBN:0198506732]
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0016192
name: vesicle-mediated transport
alt_id: GO:0006899
namespace: biological_process
def: "The directed movement of substances\, either within a vesicle or in the vesicle membrane\, into\, out of or within a cell." [GO:ai]
subset: goslim_yeast
subset: gosubset_prok
related_synonym: "ARF small monomeric GTPase activity" []
related_synonym: "RAB small monomeric GTPase activity" []
related_synonym: "synaptic vesicle fission" []
related_synonym: "synaptic vesicle fusion" []
related_synonym: "synaptic vesicle internalization" []
related_synonym: "synaptic vesicle retrieval" []
related_synonym: "vesicle fusion" []
related_synonym: "vesicle-fusing ATPase activity" []
exact_synonym: "vesicle transport" []
narrow_synonym: "nonselective vesicle transport" []
is_a: GO:0006810

[Term]
id: GO:0019725
name: cell homeostasis
namespace: biological_process
def: "Any of the processes involved in the maintenance of an internal equilibrium within a cell or between a cell and its external environment." [GO:jl, ISBN:0395825172]
subset: goslim_generic
subset: goslim_plant
subset: goslim_yeast
subset: gosubset_prok
is_a: GO:0008150

[Term]
id: GO:0030163
name: protein catabolism
namespace: biological_process
def: "The breakdown into simpler components of a protein by the destruction of the native\, active configuration\, with or without the hydrolysis of peptide bonds." [GO:mah]
subset: goslim_yeast
subset: gosubset_prok
exact_synonym: "protein breakdown" []
exact_synonym: "protein degradation" []
narrow_synonym: "pheromone catabolism (sensu Saccharomyces)" []
is_a: GO:0008150

[Term]
id: GO:0030435
name: sporulation
namespace: biological_process
def: "The formation of spores." [ISBN:0198506732]
comment: Note that the synonym 'spore differentiation'\, like the term name and definition\, refers to differentiation into a spore rather than any subsequent developmental changes that a spore may undergo.
subset: goslim_yeast
subset: gosubset_prok
exact_synonym: "spore differentiation" []
exact_synonym: "spore formation" []
is_a: GO:0008150

[Term]
id: GO:0042254
name: ribosome biogenesis and assembly
namespace: biological_process
def: "The processes of biogenesis and assembly of the ribosome and its subunits." [FB:ma]
subset: goslim_yeast
subset: gosubset_prok
related_synonym: "ribosomal chaperone activity" []
is_a: GO:0006996

[Term]
id: GO:0045333
name: cellular respiration
namespace: biological_process
def: "The enzymatic release of energy from organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration)." [ISBN:0140513590, ISBN:0198506732]
subset: goslim_yeast
subset: gosubset_prok
exact_synonym: "oxidative metabolism" []
broad_synonym: "respiration" []
is_a: GO:0006091