Index Seq ID Count Primer type Orientation Start Len tm GC% Any compl 3' compl Seq Prod size Seq len Included len Pair any compl Pair 3' compl Motif Motif Len SSR SSRLen 1 @GRC13_0019_FC:7:3:18143:10261#CTGT/1_@GRC13_0019_FC:7:3:18143:10261#CTTA/2 1 SSR FORWARD 1 19 53.72 47.37 4.00 2.00 AATTCAGTCGTCGTGCTAC 153 202 202 5.00 2.00 TTG 3 TTGTTGTTGTTGTTGTTG 18 2 @GRC13_0019_FC:7:3:18143:10261#CTGT/1_@GRC13_0019_FC:7:3:18143:10261#CTTA/2 1 SSR REVERSE 153 19 54.38 42.11 2.00 0.00 CACCACAATCACAACAACA 3 @GRC13_0019_FC:7:3:18143:10261#CTGT/1_@GRC13_0019_FC:7:3:18143:10261#CTTA/2 1 SSR FORWARD 1 19 53.72 47.37 4.00 2.00 AATTCAGTCGTCGTGCTAC 153 202 202 5.00 2.00 GTG 3 GTGGTGGTGGTG 12 4 @GRC13_0019_FC:7:3:18143:10261#CTGT/1_@GRC13_0019_FC:7:3:18143:10261#CTTA/2 1 SSR REVERSE 153 19 54.38 42.11 2.00 0.00 CACCACAATCACAACAACA 5 @GRC13_0019_FC:7:3:18143:10261#CTGT/1_@GRC13_0019_FC:7:3:18143:10261#CTTA/2 1 SSR FORWARD 32 19 54.38 42.11 2.00 0.00 TGTTGTTGTGATTGTGGTG 168 202 202 4.00 1.00 GTT 3 GTTGTTGTTGTTGTT 15 6 @GRC13_0019_FC:7:3:18143:10261#CTGT/1_@GRC13_0019_FC:7:3:18143:10261#CTTA/2 1 SSR REVERSE 199 19 54.38 42.11 2.00 1.00 AACATAGCAAGGCAACTGA 7 @GRC13_0019_FC:7:3:18143:10261#CTGT/1_@GRC13_0019_FC:7:3:18143:10261#CTTA/2 1 SSR FORWARD 32 19 54.38 42.11 2.00 0.00 TGTTGTTGTGATTGTGGTG 168 202 202 4.00 1.00 GTG 3 GTGGTGGTGGTG 12 8 @GRC13_0019_FC:7:3:18143:10261#CTGT/1_@GRC13_0019_FC:7:3:18143:10261#CTTA/2 1 SSR REVERSE 199 19 54.38 42.11 2.00 1.00 AACATAGCAAGGCAACTGA 9 @GRC13_0019_FC:7:4:18871:11775#TCCA/1_@GRC13_0019_FC:7:4:18871:11775#CTGT/2 1 SSR FORWARD 29 18 52.38 50.00 5.00 3.00 CTGTCCCCTGAAGACTTT 117 202 202 5.00 1.00 ACC 3 ACCACCACCACC 12 10 @GRC13_0019_FC:7:4:18871:11775#TCCA/1_@GRC13_0019_FC:7:4:18871:11775#CTGT/2 1 SSR REVERSE 145 18 54.55 50.00 2.00 1.00 TGGTGGTCTTGTTGGAGT 11 @GRC13_0019_FC:7:4:18871:11775#TCCA/1_@GRC13_0019_FC:7:4:18871:11775#CTGT/2 1 SSR FORWARD 51 19 54.27 47.37 2.00 0.00 TCAACTCCAACAAGACCAC 141 202 202 3.00 1.00 ACC 3 ACCACCACCACC 12 12 @GRC13_0019_FC:7:4:18871:11775#TCCA/1_@GRC13_0019_FC:7:4:18871:11775#CTGT/2 1 SSR REVERSE 191 19 53.78 52.63 4.00 1.00 GTAAGAGGATACCGGGAAG 13 @GRC13_0019_FC:7:8:7778:19169#CTGT/1_@GRC13_0019_FC:7:8:7778:19169#CTGT/2 1 SSR FORWARD 56 20 53.81 35.00 5.00 0.00 AAAATCAGATACCCTTTCCA 107 202 202 5.00 3.00 GAA 3 GAAGAAGAAGAA 12 14 @GRC13_0019_FC:7:8:7778:19169#CTGT/1_@GRC13_0019_FC:7:8:7778:19169#CTGT/2 1 SSR REVERSE 162 20 53.81 40.00 3.00 0.00 GAATGTTGTGATGTTGAAGG 15 @GRC13_0019_FC:7:13:14687:9952#CTGT/1_@GRC13_0019_FC:7:13:14687:9952#CTGT/2 1 SSR FORWARD 9 17 56.39 58.82 3.00 2.00 ACGACGACAACGACGAC 138 202 202 4.00 3.00 GAT 3 GATGATGATGAT 12 16 @GRC13_0019_FC:7:13:14687:9952#CTGT/1_@GRC13_0019_FC:7:13:14687:9952#CTGT/2 1 SSR REVERSE 146 20 53.91 40.00 5.00 1.00 TCATCATCATCATCCTCATC 17 @GRC13_0019_FC:7:13:14687:9952#CTGT/1_@GRC13_0019_FC:7:13:14687:9952#CTGT/2 1 SSR FORWARD 9 17 56.39 58.82 3.00 2.00 ACGACGACAACGACGAC 138 202 202 4.00 3.00 ATG 3 ATGATGATGATG 12 18 @GRC13_0019_FC:7:13:14687:9952#CTGT/1_@GRC13_0019_FC:7:13:14687:9952#CTGT/2 1 SSR REVERSE 146 20 53.91 40.00 5.00 1.00 TCATCATCATCATCCTCATC 19 @GRC13_0019_FC:7:13:14687:9952#CTGT/1_@GRC13_0019_FC:7:13:14687:9952#CTGT/2 1 SSR FORWARD 46 22 52.93 31.82 3.00 3.00 TGAATAGTGATGAAGAACAATG 124 202 202 7.00 3.00 GAT 3 GATGATGATGATGAT 15 20 @GRC13_0019_FC:7:13:14687:9952#CTGT/1_@GRC13_0019_FC:7:13:14687:9952#CTGT/2 1 SSR REVERSE 169 22 53.17 36.36 4.00 2.00 CATCATAGTCATATTCATCGTG 21 @GRC13_0019_FC:7:13:10370:14853#CTGT/1_@GRC13_0019_FC:7:13:10370:14853#CTGT/2 1 SSR FORWARD 13 20 53.31 50.00 3.00 0.00 TCTAATACCCCCTCACTCTC 136 202 202 3.00 0.00 TCA 3 TCATCATCATCATCATCA 18 22 @GRC13_0019_FC:7:13:10370:14853#CTGT/1_@GRC13_0019_FC:7:13:10370:14853#CTGT/2 1 SSR REVERSE 148 19 52.87 42.11 6.00 3.00 TGATGATGATGATGACCAC 23 @GRC13_0019_FC:7:13:10370:14853#CTGT/1_@GRC13_0019_FC:7:13:10370:14853#CTGT/2 1 SSR FORWARD 18 19 54.45 52.63 2.00 2.00 TACCCCCTCACTCTCTCAT 131 202 202 5.00 1.00 TCA 3 TCATCATCATCATCA 15 24 @GRC13_0019_FC:7:13:10370:14853#CTGT/1_@GRC13_0019_FC:7:13:10370:14853#CTGT/2 1 SSR REVERSE 148 19 52.87 42.11 6.00 3.00 TGATGATGATGATGACCAC 25 @GRC13_0019_FC:7:13:10370:14853#CTGT/1_@GRC13_0019_FC:7:13:10370:14853#CTGT/2 1 SSR FORWARD 17 19 54.45 52.63 2.00 1.00 ATACCCCCTCACTCTCTCA 164 202 202 6.00 3.00 TCA 3 TCATCATCATCATCATCA 18 26 @GRC13_0019_FC:7:13:10370:14853#CTGT/1_@GRC13_0019_FC:7:13:10370:14853#CTGT/2 1 SSR REVERSE 180 22 53.91 40.91 2.00 2.00 AGAGACATTAGGGTTAGGGTTA 27 @GRC13_0019_FC:7:20:18071:9334#CTTC/1_@GRC13_0019_FC:7:20:18071:9334#CTGT/2 1 SSR FORWARD 25 19 53.82 42.11 2.00 1.00 ATCCTCGTCATCAAAGTCA 159 202 202 7.00 3.00 TCA 3 TCATCATCATCA 12 28 @GRC13_0019_FC:7:20:18071:9334#CTTC/1_@GRC13_0019_FC:7:20:18071:9334#CTGT/2 1 SSR REVERSE 183 19 54.19 47.37 4.00 2.00 GACCACAATGATGATGACC 29 @GRC13_0019_FC:7:20:18071:9334#CTTC/1_@GRC13_0019_FC:7:20:18071:9334#CTGT/2 1 SSR FORWARD 25 19 53.82 42.11 2.00 1.00 ATCCTCGTCATCAAAGTCA 159 202 202 7.00 3.00 TCA 3 TCATCATCATCATCATCATCA 21 30 @GRC13_0019_FC:7:20:18071:9334#CTTC/1_@GRC13_0019_FC:7:20:18071:9334#CTGT/2 1 SSR REVERSE 183 19 54.19 47.37 4.00 2.00 GACCACAATGATGATGACC 31 @GRC13_0019_FC:7:22:11405:13759#CTGT/1_@GRC13_0019_FC:7:22:11405:13759#GTCT/2 1 SSR FORWARD 36 19 52.99 42.11 4.00 2.00 TTGTCTTTCCTGAACCTGT 129 202 202 5.00 3.00 ACC 3 ACCACCACCACC 12 32 @GRC13_0019_FC:7:22:11405:13759#CTGT/1_@GRC13_0019_FC:7:22:11405:13759#GTCT/2 1 SSR REVERSE 164 19 53.48 36.84 4.00 2.00 AATTCGTGAAAATCAGGTG 33 @GRC13_0019_FC:7:22:11405:13759#CTGT/1_@GRC13_0019_FC:7:22:11405:13759#GTCT/2 1 SSR FORWARD 51 19 53.84 47.37 4.00 1.00 CTGTTTCTCCAACAACCAC 119 202 202 6.00 3.00 ACC 3 ACCACCACCACC 12 34 @GRC13_0019_FC:7:22:11405:13759#CTGT/1_@GRC13_0019_FC:7:22:11405:13759#GTCT/2 1 SSR REVERSE 169 20 53.75 35.00 4.00 3.00 CAGGTAATTCGTGAAAATCA 35 @GRC13_0019_FC:7:23:4497:7202#CTGT/1_@GRC13_0019_FC:7:23:4497:7202#CAAA/2 1 SSR FORWARD 12 19 54.06 47.37 3.00 0.00 TACGCTTCTGGTATGCTTC 138 202 202 3.00 2.00 CTC 3 CTCCTCCTCCTCCTCCTC 18 36 @GRC13_0019_FC:7:23:4497:7202#CTGT/1_@GRC13_0019_FC:7:23:4497:7202#CAAA/2 1 SSR REVERSE 149 18 54.01 55.56 2.00 0.00 AGATTGGAGGAGGAGGAG 37 @GRC13_0019_FC:7:23:4497:7202#CTGT/1_@GRC13_0019_FC:7:23:4497:7202#CAAA/2 1 SSR FORWARD 25 19 54.21 47.37 2.00 0.00 TGCTTCTTCTTCTCCTCCT 137 202 202 4.00 1.00 TCC 3 TCCTCCTCCTCCTCCTCC 18 38 @GRC13_0019_FC:7:23:4497:7202#CTGT/1_@GRC13_0019_FC:7:23:4497:7202#CAAA/2 1 SSR REVERSE 161 17 54.87 47.06 2.00 1.00 ATGCTGATGCCGAGATT 39 @GRC13_0019_FC:7:37:3930:17054#CTGT/1_@GRC13_0019_FC:7:37:3930:17054#CTGA/2 1 SSR FORWARD 41 19 53.40 42.11 2.00 2.00 TTCTTGCTCTTCTTCTTCG 145 202 202 3.00 1.00 TCT 3 TCTTCTTCTTCTTCT 15 40 @GRC13_0019_FC:7:37:3930:17054#CTGT/1_@GRC13_0019_FC:7:37:3930:17054#CTGA/2 1 SSR REVERSE 185 19 55.02 52.63 3.00 2.00 CACTGAGGTTCACATACGC 41 @GRC13_0019_FC:7:75:8758:19580#CTGT/1_@GRC13_0019_FC:7:75:8758:19580#CTGT/2 1 SSR FORWARD 36 19 55.05 47.37 3.00 0.00 TGTCTGTGACTTGCTTGGT 125 202 202 4.00 0.00 TTC 3 TTCTTCTTCTTC 12 42 @GRC13_0019_FC:7:75:8758:19580#CTGT/1_@GRC13_0019_FC:7:75:8758:19580#CTGT/2 1 SSR REVERSE 160 19 53.84 47.37 2.00 0.00 GGGAAAGAAAAGGTAGGTG 43 @GRC13_0019_FC:7:108:17109:4543#CTGT/1_@GRC13_0019_FC:7:108:17109:4543#CTGT/2 1 SSR FORWARD 10 18 53.91 55.56 5.00 0.00 GATGAGGCTGATGGCTAC 177 202 202 7.00 3.00 TGA 3 TGATGATGATGATGATGATGATGATGA 27 44 @GRC13_0019_FC:7:108:17109:4543#CTGT/1_@GRC13_0019_FC:7:108:17109:4543#CTGT/2 1 SSR REVERSE 186 19 51.75 42.11 3.00 2.00 TCATACTCATCATCGTGGT 45 @GRC13_0019_FC:7:108:17109:4543#CTGT/1_@GRC13_0019_FC:7:108:17109:4543#CTGT/2 1 SSR FORWARD 10 18 53.91 55.56 5.00 0.00 GATGAGGCTGATGGCTAC 177 202 202 7.00 3.00 GAT 3 GATGATGATGAT 12 46 @GRC13_0019_FC:7:108:17109:4543#CTGT/1_@GRC13_0019_FC:7:108:17109:4543#CTGT/2 1 SSR REVERSE 186 19 51.75 42.11 3.00 2.00 TCATACTCATCATCGTGGT 47 @GRC13_0019_FC:7:119:7184:9524#CTGT/1_@GRC13_0019_FC:7:119:7184:9524#CTGT/2 1 SSR FORWARD 40 19 52.47 36.84 5.00 3.00 ATGCTGATGATGAACAATG 149 202 202 8.00 3.00 GAT 3 GATGATGATGATGATGATGATGATGATGATGAT 33 48 @GRC13_0019_FC:7:119:7184:9524#CTGT/1_@GRC13_0019_FC:7:119:7184:9524#CTGT/2 1 SSR REVERSE 188 17 52.02 47.06 4.00 2.00 CATCATCATCGTGGTCA