LOCUS pNE2001_Arg1 5701 bp ds-DNA circular 22-APR-2014 DEFINITION . ACCESSION VERSION SOURCE . ORGANISM . COMMENT COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers misc_feature complement(3337..3889) /label=RnaII /ApEinfo_fwdcolor=#0000ff /ApEinfo_revcolor=#0000ff /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 source 27..1625 /organism="Thermotoga maritima MSB8" /mol_type="genomic DNA" /strain="MSB8" /db_xref="taxon:243274" /label=source:Thermotoga maritima MSB8 /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 1710..1727 /label=6x His Tag /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature complement(3989..4008) /label=G00101 /ApEinfo_fwdcolor=#8080ff /ApEinfo_revcolor=#8080ff /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 1302..1307 /label=BamHI /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#00ff00 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 5689..5694 /label=BB_RBS /ApEinfo_fwdcolor=#ff8000 /ApEinfo_revcolor=#ff8000 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 1531..1536 /label=BamHI(1) /ApEinfo_label=BamHI /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#00ff00 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 1653..1658 /label=HindIII /ApEinfo_fwdcolor=#408080 /ApEinfo_revcolor=#9ecfcf /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 4386..4391 /label=SphI /ApEinfo_fwdcolor=#80ff80 /ApEinfo_revcolor=#80ff80 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 1652..1709 /label=OleD /ApEinfo_fwdcolor=#3dfa31 /ApEinfo_revcolor=green /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 71..76 /label=EcoRI /ApEinfo_fwdcolor=#0080ff /ApEinfo_revcolor=#0080ff /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 rep_origin 3225..3907 /label=ColE1 origin /ApEinfo_fwdcolor=gray50 /ApEinfo_revcolor=gray50 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 101..106 /label=EcoRI(1) /ApEinfo_label=EcoRI /ApEinfo_fwdcolor=#0080ff /ApEinfo_revcolor=#0080ff /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 CDS 2468..3127 /label=AmpR /ApEinfo_fwdcolor=#f8c887 /ApEinfo_revcolor=#f8c887 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 696..701 /label=EcoRI(2) /ApEinfo_label=EcoRI /ApEinfo_fwdcolor=#0080ff /ApEinfo_revcolor=#0080ff /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 5622..5627 /label=BamHI(2) /ApEinfo_label=BamHI /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#00ff00 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 1139..1144 /label=EcoRI(3) /ApEinfo_label=EcoRI /ApEinfo_fwdcolor=#0080ff /ApEinfo_revcolor=#0080ff /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 4479..5357 /label=AraC /ApEinfo_fwdcolor=#83ba01 /ApEinfo_revcolor=#83ba01 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 109..114 /label=BglII /ApEinfo_fwdcolor=#00ff80 /ApEinfo_revcolor=#00ff80 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 5385..5622 /label=Pbad promoter /ApEinfo_fwdcolor=#017e43 /ApEinfo_revcolor=#017e43 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 643..648 /label=BglII(1) /ApEinfo_label=BglII /ApEinfo_fwdcolor=#00ff80 /ApEinfo_revcolor=#00ff80 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 1833..1990 /label=TrrnB terminator /ApEinfo_fwdcolor=#ff8040 /ApEinfo_revcolor=#ff8040 /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 gene 27..1625 /locus_tag="TM_1093" /old_locus_tag="TM1093" /label=gene /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 CDS 27..1625 /locus_tag="TM_1093" /old_locus_tag="TM1093" /note="similar to SP:P46906 PID:971336 PID:2224756 GB:AL009126 percent identity: 67.62; identified by sequence similarity; putative" /codon_start=1 /transl_table=11 /product="arginyl-tRNA synthetase" /protein_id="AAD36169.1" /db_xref="GI:4981637" /translation="MLVNAIRQKVSEVISKAYGSEIEFEVEIPPRKEFGDLSTNVAMK LAKTLKKNPREIAQEIVKSLDEDPSFDRIEIMGPGFINFFLSNELLRGVVKTVLEKKD EYGRENVGNGMKVQFEYGSANPTGPFTVGHGRQIIIGDVLSEVYKELGYDVTREMYIN DAGKQIRLLAQSLWARYNQLLGVEKEIPEGGYRGEYLVDIARDLVNEIGDRYKDLWNE EVEEFFKQTALNRILSSMKDTLEKIGSSFDVYFSEKSLIEDGTVEEVLKLLKNKDVVY EKDGAVWLKVSAFIDEEDKVLVRSDGTYTYFMTDIAYHYKKYKRGFRKVYDIWGSDHH GHIPRMKAAMKALDIPDDFFNVILHQFVTLKRGGEIVRMSTRAGEFVTLDELLDEVGR DATRYFFAMVDPNTHMVFDIDLAKAKSMDNPVYYVQYAHARIHNLFSNAEKKGVKFEE GKHLELLGNEEERVLMRNLGMFNTALKEVAQMFAPNRLTNYLQSLAESFHAFYTKHVI VDPENPELSNARLNLALATGIVLRKGLKLIGVSAPERM" /label=arginyl-tRNA synthetase /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 misc_feature 1646..1651 /label=EcoRI(4) /ApEinfo_label=EcoRI /ApEinfo_fwdcolor=#0080ff /ApEinfo_revcolor=#0080ff /ApEinfo_graphicformat=arrow_data {{0 1 2 0 0 -1} {} 0} width 5 offset 0 ORIGIN 1 CATGGcaCTG GTGAACGCGA TCAGGCaaaa ggtgtccgaa gtcatctcta aagcgtacgg 61 ttcagaaatc gaattcgagg tcgaaattcc acccagaaag gaattcggag atctgtccac 121 caacgttgcc atgaagctcg caaaaacttt gaagaaaaac ccgcgggaga tagctcagga 181 gatcgtaaaa agtctcgatg aagatccctc gtttgacagg atagaaatca tgggacccgg 241 tttcataaat ttcttcctgt cgaacgaact gctccgtgga gtggttaaaa ccgtgctgga 301 gaaaaaagac gagtacggga gagagaacgt tggaaatgga atgaaggtgc agttcgaata 361 cggaagtgca aacccaacgg gaccattcac cgttgggcac ggtagacaga tcatcatagg 421 tgacgtgctt tccgaggttt acaaagagct cggttacgat gtgacgaggg aaatgtatat 481 aaacgacgcc ggaaagcaga taaggcttct cgctcagtcg ctttgggcaa ggtacaatca 541 gcttctcgga gttgaaaaag aaattcccga agggggctat cgcggggaat acctcgtgga 601 catcgcgagg gatctggtga acgaaatcgg agatagatac aaagatctgt ggaacgaaga 661 agtggaggag tttttcaaac agacagcgct gaacagaatt ctctcctcca tgaaagatac 721 ccttgaaaag attggttctt cgttcgatgt gtacttctca gaaaagagtt tgatagagga 781 tgggactgtc gaagaggtgc tgaaactcct caagaacaag gacgttgttt acgaaaaaga 841 cggtgctgtg tggttgaaag tctctgcctt catagatgag gaagacaagg ttcttgtgag 901 aagcgacggt acatacacgt acttcatgac ggatatcgcg tatcactaca agaaatataa 961 gagaggcttc aggaaggttt acgacatctg gggtagtgac catcacggtc acataccaag 1021 aatgaaggca gcgatgaaag ccctcgacat tcccgacgat ttcttcaacg ttatactgca 1081 tcagttcgtt actctgaaac gtggtgggga aatcgttcgc atgtccacgc gagcgggaga 1141 attcgtcact ctggacgaac ttctcgacga agtgggaaga gacgccaccc gatatttctt 1201 tgcgatggtg gaccccaata cccacatggt gttcgatatc gatctggcga aggccaaatc 1261 catggacaac ccagtttact acgttcagta cgcacatgcc aggatccaca atctcttctc 1321 caacgcggaa aagaaaggtg tgaagtttga agagggaaaa caccttgaac tgcttggaaa 1381 cgaagaagaa agggttctga tgagaaacct cggtatgttc aacaccgctt tgaaagaggt 1441 cgcgcagatg ttcgcaccaa acaggctcac gaactatctc cagtcgcttg ctgagtcctt 1501 ccacgcattc tacaccaaac acgtgatagt ggatcctgaa aatcccgaac tttcgaacgc 1561 gcgactcaac cttgccctcg caacgggtat cgttttaaga aagggtctga aactcatagg 1621 agtttCCGCA CCAGAGAGGA TGTGAGAATT CGAAGCTTGG GCCCGAACAA AAACTCATCT 1681 CAGAAGAGGA TCTGAATAGC GCCGTCGACC ATCATCATCA TCATCATTGA GTTTAAACGG 1741 TCTCCAGCTT GGCTGTTTTG GCGGATGAGA GAAGATTTTC AGCCTGATAC AGATTAAATC 1801 AGAACGCAGA AGCGGTCTGA TAAAACAGAA TTTGCCTGGC GGCAGTAGCG CGGTGGTCCC 1861 ACCTGACCCC ATGCCGAACT CAGAAGTGAA ACGCCGTAGC GCCGATGGTA GTGTGGGGTC 1921 TCCCCATGCG AGAGTAGGGA ACTGCCAGGC ATCAAATAAA ACGAAAGGCT CAGTCGAAAG 1981 ACTGGGCCTT TCGTTTTATC TGTTGTTTGT CGGTGAACGC TCTCCTGAGT AGGACAAATC 2041 CGCCGGGAGC GGATTTGAAC GTTGCGAAGC AACGGCCCGG AGGGTGGCGG GCAGGACGCC 2101 CGCCATAAAC TGCCAGGCAT CAAATTAAGC AGAAGGCCAT CCTGACGGAT GGCCTTTTTG 2161 CGTTTCTACA AACTCTTTTT GTTTATTTTT CTAAATACAT TCAAATATGT ATCCGCTCAT 2221 GAGACAATAA CCCTGATAAA TGCTTCAATA ATATTGAAAA AGGAAGAGTA TGAGTATTCA 2281 ACATTTCCGT GTCGCCCTTA TTCCCTTTTT TGCGGCATTT TGCCTTCCTG TTTTTGCTCA 2341 CCCAGAAACG CTGGTGAAAG TAAAAGATGC TGAAGATCAG TTGGGTGCAC GAGTGGGTTA 2401 CATCGAACTG GATCTCAACA GCGGTAAGAT CCTTGAGAGT TTTCGCCCCG AAGAACGTTT 2461 TCCAATGATG AGCACTTTTA AAGTTCTGCT ATGTGGCGCG GTATTATCCC GTGTTGACGC 2521 CGGGCAAGAG CAACTCGGTC GCCGCATACA CTATTCTCAG AATGACTTGG TTGAGTACTC 2581 ACCAGTCACA GAAAAGCATC TTACGGATGG CATGACAGTA AGAGAATTAT GCAGTGCTGC 2641 CATAACCATG AGTGATAACA CTGCGGCCAA CTTACTTCTG ACAACGATCG GAGGACCGAA 2701 GGAGCTAACC GCTTTTTTGC ACAACATGGG GGATCATGTA ACTCGCCTTG ATCGTTGGGA 2761 ACCGGAGCTG AATGAAGCCA TACCAAACGA CGAGCGTGAC ACCACGATGC CTGTAGCAAT 2821 GGCAACAACG TTGCGCAAAC TATTAACTGG CGAACTACTT ACTCTAGCTT CCCGGCAACA 2881 ATTAATAGAC TGGATGGAGG CGGATAAAGT TGCAGGACCA CTTCTGCGCT CGGCCCTTCC 2941 GGCTGGCTGG TTTATTGCTG ATAAATCTGG AGCCGGTGAG CGTGGGTCTC GCGGTATCAT 3001 TGCAGCACTG GGGCCAGATG GTAAGCCCTC CCGTATCGTA GTTATCTACA CGACGGGGAG 3061 TCAGGCAACT ATGGATGAAC GAAATAGACA GATCGCTGAG ATAGGTGCCT CACTGATTAA 3121 GCATTGGTAA CTGTCAGACC AAGTTTACTC ATATATACTT TAGATTGATT TAAAACTTCA 3181 TTTTTAATTT AAAAGGATCT AGGTGAAGAT CCTTTTTGAT AATCTCATGA CCAAAATCCC 3241 TTAACGTGAG TTTTCGTTCC ACTGAGCGTC AGACCCCGTA GAAAAGATCA AAGGATCTTC 3301 TTGAGATCCT TTTTTTCTGC GCGTAATCTG CTGCTTGCAA ACAAAAAAAC CACCGCTACC 3361 AGCGGTGGTT TGTTTGCCGG ATCAAGAGCT ACCAACTCTT TTTCCGAAGG TAACTGGCTT 3421 CAGCAGAGCG CAGATACCAA ATACTGTCCT TCTAGTGTAG CCGTAGTTAG GCCACCACTT 3481 CAAGAACTCT GTAGCACCGC CTACATACCT CGCTCTGCTA ATCCTGTTAC CAGTGGCTGC 3541 TGCCAGTGGC GATAAGTCGT GTCTTACCGG GTTGGACTCA AGACGATAGT TACCGGATAA 3601 GGCGCAGCGG TCGGGCTGAA CGGGGGGTTC GTGCACACAG CCCAGCTTGG AGCGAACGAC 3661 CTACACCGAA CTGAGATACC TACAGCGTGA GCTATGAGAA AGCGCCACGC TTCCCGAAGG 3721 GAGAAAGGCG GACAGGTATC CGGTAAGCGG CAGGGTCGGA ACAGGAGAGC GCACGAGGGA 3781 GCTTCCAGGG GGAAACGCCT GGTATCTTTA TAGTCCTGTC GGGTTTCGCC ACCTCTGACT 3841 TGAGCGTCGA TTTTTGTGAT GCTCGTCAGG GGGGCGGAGC CTATGGAAAA ACGCCAGCAA 3901 CGCGGCCTTT TTACGGTTCC TGGCCTTTTG CTGGCCTTTT GCTCACATGT TCTTTCCTGC 3961 GTTATCCCCT GATTCTGTGG ATAACCGTAT TACCGCCTTT GAGTGAGCTG ATACCGCTCG 4021 CCGCAGCCGA ACGACCGAGC GCAGCGAGTC AGTGAGCGAG GAAGCGGAAG AGCGCCTGAT 4081 GCGGTATTTT CTCCTTACGC ATCTGTGCGG TATTTCACAC CGCATATGGT GCACTCTCAG 4141 TACAATCTGC TCTGATGCCG CATAGTTAAG CCAGTATACA CTCCGCTATC GCTACGTGAC 4201 TGGGTCATGG CTGCGCCCCG ACACCCGCCA ACACCCGCTG ACGCGCCCTG ACGGGCTTGT 4261 CTGCTCCCGG CATCCGCTTA CAGACAAGCT GTGACCGTCT CCGGGAGCTG CATGTGTCAG 4321 AGGTTTTCAC CGTCATCACC GAAACGCGCG AGGCAGCAGA TCAATTCGCG CGCGAAGGCG 4381 AAGCGGCATG CATAATGTGC CTGTCAAATG GACGAAGCAG GGATTCTGCA AACCCTATGC 4441 TACTCCGTCA AGCCGTCAAT TGTCTGATTC GTTACCAATT ATGACAACTT GACGGCTACA 4501 TCATTCACTT TTTCTTCACA ACCGGCACGG AACTCGCTCG GGCTGGCCCC GGTGCATTTT 4561 TTAAATACCC GCGAGAAATA GAGTTGATCG TCAAAACCAA CATTGCGACC GACGGTGGCG 4621 ATAGGCATCC GGGTGGTGCT CAAAAGCAGC TTCGCCTGGC TGATACGTTG GTCCTCGCGC 4681 CAGCTTAAGA CGCTAATCCC TAACTGCTGG CGGAAAAGAT GTGACAGACG CGACGGCGAC 4741 AAGCAAACAT GCTGTGCGAC GCTGGCGATA TCAAAATTGC TGTCTGCCAG GTGATCGCTG 4801 ATGTACTGAC AAGCCTCGCG TACCCGATTA TCCATCGGTG GATGGAGCGA CTCGTTAATC 4861 GCTTCCATGC GCCGCAGTAA CAATTGCTCA AGCAGATTTA TCGCCAGCAG CTCCGAATAG 4921 CGCCCTTCCC CTTGCCCGGC GTTAATGATT TGCCCAAACA GGTCGCTGAA ATGCGGCTGG 4981 TGCGCTTCAT CCGGGCGAAA GAACCCCGTA TTGGCAAATA TTGACGGCCA GTTAAGCCAT 5041 TCATGCCAGT AGGCGCGCGG ACGAAAGTAA ACCCACTGGT GATACCATTC GCGAGCCTCC 5101 GGATGACGAC CGTAGTGATG AATCTCTCCT GGCGGGAACA GCAAAATATC ACCCGGTCGG 5161 CAAACAAATT CTCGTCCCTG ATTTTTCACC ACCCCCTGAC CGCGAATGGT GAGATTGAGA 5221 ATATAACCTT TCATTCCCAG CGGTCGGTCG ATAAAAAAAT CGAGATAACC GTTGGCCTCA 5281 ATCGGCGTTA AACCCGCCAC CAGATGGGCA TTAAACGAGT ATCCCGGCAG CAGGGGATCA 5341 TTTTGCGCTT CAGCCATACT TTTCATACTC CCGCCATTCA GAGAAGAAAC CAATTGTCCA 5401 TATTGCATCA GACATTGCCG TCACTGCGTC TTTTACTGGC TCTTCTCGCT AACCAAACCG 5461 GTAACCCCGC TTATTAAAAG CATTCTGTAA CAAAGCGGGA CCAAAGCCAT GACAAAAACG 5521 CGTAACAAAA GTGTCTATAA TCACGGCAGA AAAGTCCACA TTGATTATTT GCACGGCGTC 5581 ACACTTTGCT ATGCCATAGC ATTTTTATCC ATAAGATTAG CGGATCCTAC CTGACGCTTT 5641 TTATCGCAAC TCTCTACTGT TTCTCCATAC CCGTTTTTTT GGGCTAACAG GAGGAATTAA 5701 C //