function GRNstruct = reGraph(GRNstruct,figBase) tmin = 0; td = GRNstruct.microData(1).data(1,:); simtime = GRNstruct.GRNModel(1).simtime; tmax = max(simtime); model = GRNstruct.GRNModel(1).model; plot_colors = 'kbrcm'; for qq = 1:2 for ii=1:GRNstruct.GRNParams.n_active_genes figure(ii+figBase),hold on plot(td,GRNstruct.microData(qq).data(ii+1,:),[plot_colors(qq) 'o'],'LineWidth',3),axis([tmin tmax -3 3]); plot(simtime,GRNstruct.GRNModel(qq).model(ii,:),[plot_colors(qq) '-']); title(GRNstruct.labels.TX1{1+(ii),2},'FontSize',16) xlabel('Time (minutes)','FontSize',16) ylabel('Expression (log2 fold change)','FontSize',16) if strcmp(GRNstruct.labels.TX1{1+(ii),2},'MIG2') axis([tmin tmax -3 6]); end end end end